Project Summary         Research Team         Publications         Presentations
 
              Contact               Genome Prairie               Workshops               Symposium

This project is supported by Genome Prairie & Genome Canada, a not-for-profit organization which is leading Canada's
national genomics strategy with $600 million in funding from the federal government.

 

Home

Objectives

Canola Genomics

Seed Development

Seed Composition

Research Team

Outcomes

GE3LS

Links

Publications

Newsletters

Presentations

Workshops

Symposium

Contact Us

Careers

 

 

 


Publications ~ Other Publications

 

Publications

 

  1. Bonham-Smith,P.C., Gilmer,S., Zhou,R., Galka,M., and Abrams,S.R. 2006. Non-lethal freezing effects on seed degreening in Brassica napus. Planta 1-10.

  2. Chiwocha,S.D., Abrams,S.R., Ambrose,S.J., Cutler,A.J., Loewen,M., Ross,A.R., and Kermode,A.R. 2003. A method for profiling classes of plant hormones and their metabolites using liquid chromatography-electrospray ionization tandem mass spectrometry: an analysis of hormone regulation of thermodormancy of lettuce (Lactuca sativa L.) seeds. Plant J. 35: 405-417.

  3. Chiwocha,S.D., Cutler,A.J., Abrams,S.R., Ambrose,S.J., Yang,J., Ross,A.R., and Kermode,A.R. 2005. The etr1-2 mutation in Arabidopsis thaliana affects the abscisic acid, auxin, cytokinin and gibberellin metabolic pathways during maintenance of seed dormancy, moist-chilling and germination. Plant J. 42: 35-48.

  4. Das,S., Hussain,A., Bock,C., Keller,W.A., and Georges,F. 2005. Cloning of Brassica napus phospholipase C2 (BnPLC2), phosphatidylinositol 3-kinase (BnVPS34) and phosphatidylinositol synthase1 (BnPtdIns S1)--comparative analysis of the effect of abiotic stresses on the expression of phosphatidylinositol signal transduction-related genes in B. napus. Planta 220: 777-784.

  5. Dong,J., Keller,W.A., Yan,W., and Georges,F. 2004. Gene expression at early stages of Brassica napus seed development as revealed by transcript profiling of seed-abundant cDNAs. Planta 218: 483-491.

  6. Galka,P.W., Ambrose,S.J., Ross,A.R., and Abrams,S.R. 2005. Synthesis of deuterated jasmonates for mass spectrometry and metabolism studies. J. Labelled Compounds and Radiopharmaceuticals 48: 797-809.

  7. Gao,M.J., Schafer,U.A., Parkin,I.A., Hegedus,D.D., Lydiate,D.J., and Hannoufa,A. 2003. A novel protein from Brassica napus has a putative KID domain and responds to low temperature. Plant J. 33: 1073-1086.

  8. Hegedus,D., Yu,M., Baldwin,D., Gruber,M., Sharpe,A., Parkin,I., Whitwill,S., and Lydiate,D. 2003. Molecular characterization of Brassica napus NAC domain transcriptional activators induced in response to biotic and abiotic stress. Plant Mol. Biol. 53: 383-397.

  9. Hou,A., Liu,K., Catawatcharakul,N., Tang,X., Nguyen,V., Keller,W.A., Tsang,E.W., and Cui,Y. 2005. Two naturally occurring deletion mutants of 12S seed storage proteins in Arabidopsis thaliana. Planta 222: 512-520.

  10. Jadhav,A., Katavic,V., Marillia,E.F., Michael,G.E., Barton,D.L., Kumar,A., Sonntag,C., Babic,V., Keller,W.A., and Taylor,D.C. 2005. Increased levels of erucic acid in Brassica carinata by co-suppression and antisense repression of the endogenous FAD2 gene. Metab Eng 7: 215-220.

  11. Katavic,V., Barton,D.L., Mietkiewska,E., and Taylor,D.C. 2004. Improving Very Long Chain Fatty Acid Content in Brassica Oilseeds: Studies and Manipulations of Microsomal Elongases. Recent Research Developments in Plant Biology 5: 43-52.

  12. Li,F., Wu,X., Tsang,E., and Cutler,A.J. 2005. Transcriptional profiling of imbibed Brassica napus seed. Genomics 86: 718-730.

  13. Lin,B.L., Wang,H.J., Wang,J.S., Zaharia,L.I., and Abrams,S.R. 2005. ABA regulation of heterophylly in Marsilea quadrifolia: effects of R (-)- S (+)-isomers. J. Exp. Bot. 56: 2935-2948.

  14. Lin,B.L., Wang,H.J., Wang,J.S., Zaharia,L.I., and Abrams,S.R. 2005. Abscisic acid regulation of heterophylly in Marsilea quadrifolia L.: effects of R-(-) and S-(+) isomers. J. Exp. Bot. 56: 2935-2948.

  15. Links,M., Nowak,J., and Crosby,W. 2004. Large scale EST analysis. Computational Genomics: Theory and Application. In Press.

  16. Mietkiewska,E., Giblin,E.M., Wang,S., Barton,D.L., Dirpaul,J., Brost,J.M., Katavic,V., and Taylor,D.C. 2004. Seed-specific heterologous expression of a nasturtium FAE gene in Arabidopsis results in a dramatic increase in the proportion of erucic acid. Plant Physiol 136: 2665-2675.

  17. Prakash,V., Xiang,D., Kushalappa,K., Keller,W., Palmer,D., Selvaraj,G., and Datla,R. 2004. Developmental and molecular genetics of embryogenesis in plants. In Vitro Plant. In Press.

  18. Priest,D.M., Jackson,R.G., Ashford,D.A., Abrams,S.R., and Bowles,D.J. 2005. The use of abscisic acid analogues to analyse the substrate selectivity of UGT71B6, a UDP-glycosyltransferase of Arabidopsis thaliana. FEBS Lett. 579: 4454-4458.

  19. Qi,Q., Huang,Y., Cutler,A.J., Abrams,S.R., and Taylor,D.C. 2003. Cloning and characterization of a B. napus CPTase an its functional expression in A.thaliana. Planta 217: 547-558.

  20. Razeem,F.A., El-Kereamy, Abrams,S.R., and Hill,R.D. 2005. The RNA binding protein FCA is an abscisic acid receptor. Nature. In Press.

  21. Razeem,F.A., Luo,M., Liu,J.-H., Abrams,S.R., and Hill,R.D. 2003. Purification and characterization of a barley aleurone abscisic acid-binding protein. Journal of Biological Chemistry. In Press.

  22. Ross,A.R., Ambrose,S.J., Cutler,A.J., Feurtado,J.A., Kermode,A.R., Nelson,K.M., Zhou,R., and Abrams,S.R. 2004. Determination of endogenous and supplied deuterated abscisic acid in plant tissues by HPLC-ESI MS/MS with MRM. Analytical Biochemistry. 329: 324-333.

  23. Schafer,U.A., Hegedus,D., Bate,N.J., and Hannoufa,A. 2004. A ROS repressor-mediated binary regulation system for control of gene expression in transgenic plans. Transgenic Res. 13: 109-118.

  24. Shen W, Wei Y, Dauk M, Tan Y, Taylor DC, Selvaraj G, Zou J.Involvement of a glycerol-3-phosphate dehydrogenase in modulating the NADH/NAD+ ratio provides evidence of a mitochondrial glycerol-3-phosphate shuttle in Arabidopsis. 2006 Feb;18(2):422-41. Epub 2006 Jan 13.

  25. Sheoran,I.S., Olson,D.J., Ross,A.R., and Sawhney,V.K. 2005. Proteome analysis of embryo and endosperm from germinating tomato seeds. Proteomics. 5: 3752-3764.

  26. Wang,A., Xia,Q., Xie,W., Datla,R., and Selvaraj,G. 2003. The classical Ubisch bodies carry a sporophytically produced structural protein (RAFTIN) that is essential for pollen development. Proc. Natl. Acad. Sci. U. S. A 100: 14487-14492.

  27. Wei,Y., Shen,W., Dauk,M., Wang,F., Selvaraj,G., and Zou,J. 2004. Targeted gene disruption of glycerol-3-phosphate dehydrogenase in Colletotrichum gloeosporioides reveals evidence that glycerol is a significant transferred nutrient from host plant to fungal pathogen. J. Biol. Chem. 279: 429-435.

  28. Zaharia,L.I., Walker-Simmons,M.K., Rodriguez,C.N., and Abrams,S.R. 2004. Chemistry of abscisic acid, abscisic acid catabolites and analogs. Plant Growth Regn.

  29. Zaharia,L.I., Nicolas,C., Walker-Simmons,M.K., and Abrams,S.R. 2006. Chemistry of Abscisic Acid, Abscisic Acid Catabolites and Analogs. Journal of Plant Growth Regulation. In Press.

  30. Zaharia,L.I., Gai,Y., Nelson,K.M., Ambrose,S.J., and Abrams,S.R. 2004. Oxidation of 8'-hydroxy abscisic acid in Black Mexican Sweet maize cell suspension cultures. Phytochemistry 65: 3199-3209.

  31. Zaharia,L.I., Galka,M., Ambrose,S.J., and Abrams,S.R. 2005. Preparation of deuterated ABA metabolites for mass spectrometry and feeding studies. J. Labelled Compounds and Radiopharmaceuticals. In Press.

  32. Zheng,Z., Xia,Q., Dauk,M., Shen,W., Selvaraj,G., and Zou,J. 2003. Arabidopsis AtGPAT1, a member of the membrane-bound glycerol-3-phosphate acyltransferase gene family, is essential for tapetum differentiation and male fertility. Plant Cell 15: 1872-1887.

  33. Zhou,R., Cutler,A.J., Ambrose,S.J., Galka,M.M., Nelson,K.M., Squires,T.M., Loewen,M.K., Jadhav,A.S., Ross,A.R., Taylor,D.C., and Abrams,S.R. 2004. A new abscisic acid catabolic pathway. Plant Physiol 134: 361-369.

  34. Zhou,R., Squires,T.M., Ambrose,S.J., Abrams,S.R., Ross,A.R., and Cutler,A.J. 2003. Rapid extraction of abscisic acid and its metabolites for liquid chromatography-tandem mass spectrometry. J. Chromatogr. A 1010: 75-85.

Other Publications

see also: Oral Presentations, Posters & Outreach Presentations

 


© 2005 Enhancing Canola Through Genomics . . . A Genome Prairie Project